Detection of DNA base modifications by deep recurrent neural network on Oxford Nanopore sequencing data
Author:
Publisher
Springer Science and Business Media LLC
Subject
General Physics and Astronomy,General Biochemistry, Genetics and Molecular Biology,General Chemistry
Link
http://www.nature.com/articles/s41467-019-10168-2.pdf
Reference43 articles.
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3. Stoiber M. H., et al. De novo identification of DNA modifications enabled by genome-guided nanopore signal processing. Preprint at https://www.biorxiv.org/content/10.1101/094672v2 (2017).
4. Simpson, J. T. et al. Detecting DNA cytosine methylation using nanopore sequencing. Nat. Methods 14, 407–410 (2017).
5. He, X.-J., Chen, T. & Zhu, J.-K. Regulation and function of DNA methylation in plants and animals. Cell Res. 21, 442–465 (2011).
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