Genomic landscape of platinum resistant and sensitive testicular cancers

Author:

Loveday CheyORCID,Litchfield Kevin,Proszek Paula Z.,Cornish Alex J.,Santo Flavia,Levy Max,Macintyre GeoffORCID,Holryod Amy,Broderick PeterORCID,Dudakia Darshna,Benton Barbara,Bakir Maise Al,Hiley Crispin,Grist Emily,Swanton CharlesORCID,Huddart RobertORCID,Powles Tom,Chowdhury Simon,Shipley Janet,O’Connor Simon,Brenton James D.ORCID,Reid Alison,de Castro David GonzalezORCID,Houlston Richard S.ORCID,Turnbull Clare

Abstract

AbstractWhile most testicular germ cell tumours (TGCTs) exhibit exquisite sensitivity to platinum chemotherapy, ~10% are platinum resistant. To gain insight into the underlying mechanisms, we undertake whole exome sequencing and copy number analysis in 40 tumours from 26 cases with platinum-resistant TGCT, and combine this with published genomic data on an additional 624 TGCTs. We integrate analyses for driver mutations, mutational burden, global, arm-level and focal copy number (CN) events, and SNV and CN signatures. Albeit preliminary and observational in nature, these analyses provide support for a possible mechanistic link between early driver mutations in RAS and KIT and the widespread copy number events by which TGCT is characterised.

Publisher

Springer Science and Business Media LLC

Subject

General Physics and Astronomy,General Biochemistry, Genetics and Molecular Biology,General Chemistry

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