Spectral-based detection of chromatin loops in multiplexed super-resolution FISH data
Author:
Funder
Agence Nationale de la Recherche
Fonds Wetenschappelijk Onderzoek
Publisher
Springer Science and Business Media LLC
Link
https://www.nature.com/articles/s41467-024-51650-w.pdf
Reference46 articles.
1. Paulson, J. R., Hudson, D. F., Cisneros-Soberanis, F. & Earnshaw, W. C. Mitotic chromosomes. Semin. Cell Dev. Biol. 117, 7–29 (2021).
2. Swedlow, J. R. & Hirano, T. The making of the mitotic chromosome: modern insights into classical questions. Mol. Cell 11, 557–569 (2003).
3. Rao, S. S. et al. Cohesin loss eliminates all loop domains. Cell 171, 305–320 (2017).
4. Karpinska, M. A. & Oudelaar, A. M. The role of loop extrusion in enhancer-mediated gene activation. Curr. Opin. Genet. Dev. 79, 102022 (2023).
5. Espinola, S. M. et al. Cis-regulatory chromatin loops arise before TADs and gene activation, and are independent of cell fate during early drosophila development. Nat. Genet. 53, 477–486 (2021).
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