Improved imputation of low-frequency and rare variants using the UK10K haplotype reference panel-Reference-Cited by-同舟云学术

Improved imputation of low-frequency and rare variants using the UK10K haplotype reference panel

Published:2015-09-14 Issue:1 Volume:6 Page:
ISSN:2041-1723
Container-title:Nature Communications
language:en
Short-container-title:Nat Commun

Author:

Huang Jie, ,Howie Bryan,McCarthy Shane,Memari Yasin,Walter Klaudia,Min Josine L.,Danecek Petr,Malerba Giovanni,Trabetti Elisabetta,Zheng Hou-Feng,Gambaro Giovanni,Richards J. Brent,Durbin Richard^ORCID,Timpson Nicholas J.,Marchini Jonathan^ORCID,Soranzo Nicole^ORCID

Publisher

Springer Science and Business Media LLC

Subject

General Physics and Astronomy,General Biochemistry, Genetics and Molecular Biology,General Chemistry

Link

http://www.nature.com/articles/ncomms9111.pdf

Reference16 articles.

1. Howie, B. N., Donnelly, P. & Marchini, J. A flexible and accurate genotype imputation method for the next generation of genome-wide association studies. PLoS Genet. 5, e1000529 (2009).

2. Frazer, K. A. et al. A second generation human haplotype map of over 3.1 million SNPs. Nature 449, 851–861 (2007).

3. Abecasis, G. R. et al. An integrated map of genetic variation from 1,092 human genomes. Nature 491, 56–65 (2012).

4. Howie, B., Fuchsberger, C., Stephens, M., Marchini, J. & Abecasis, G. R. Fast and accurate genotype imputation in genome-wide association studies through pre-phasing. Nat. Genet. 44, 955–959 (2012).

5. Howie, B., Marchini, J. & Stephens, M. Genotype imputation with thousands of genomes. G3 (Bethesda) 1, 457–470 (2011).

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