A translational genomics approach identifies IL10RB as the top candidate gene target for COVID-19 susceptibility

Author:

Voloudakis GeorgiosORCID,Vicari James M.ORCID,Venkatesh Sanan,Hoffman Gabriel E.,Dobrindt KristinaORCID,Zhang Wen,Beckmann Noam D.,Higgins Christina A.ORCID,Argyriou Stathis,Jiang Shan,Hoagland Daisy,Gao LinaORCID,Corvelo André,Cho Kelly,Lee Kyung MinORCID,Bian Jiantao,Lee Jennifer S.,Iyengar Sudha K.,Luoh Shiuh-Wen,Akbarian Schahram,Striker Robert,Assimes Themistocles L.ORCID,Schadt Eric E.,Lynch Julie A.ORCID,Merad MiriamORCID,tenOever Benjamin R.,Charney Alexander W.,Brennand Kristen J.ORCID,Fullard John F.ORCID,Roussos PanosORCID, ,

Abstract

AbstractRecent efforts have identified genetic loci that are associated with coronavirus disease 2019 (COVID-19) infection rates and disease outcome severity. Translating these genetic findings into druggable genes that reduce COVID-19 host susceptibility is a critical next step. Using a translational genomics approach that integrates COVID-19 genetic susceptibility variants, multi-tissue genetically regulated gene expression (GReX), and perturbagen signatures, we identified IL10RB as the top candidate gene target for COVID-19 host susceptibility. In a series of validation steps, we show that predicted GReX upregulation of IL10RB and higher IL10RB expression in COVID-19 patient blood is associated with worse COVID-19 outcomes and that in vitro IL10RB overexpression is associated with increased viral load and activation of disease-relevant molecular pathways.

Funder

Brain and Behavior Research Foundation

U.S. Department of Health & Human Services | NIH | National Institute of Mental Health

Icahn School of Medicine at Mount Sinai

Publisher

Springer Science and Business Media LLC

Subject

Genetics (clinical),Genetics,Molecular Biology

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