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Decision tree–driven tandem mass spectrometry for shotgun proteomics

Published:2008-10-19 Issue:11 Volume:5 Page:959-964
ISSN:1548-7091
Container-title:Nature Methods
language:en
Short-container-title:Nat Methods

Author:

Swaney Danielle L,McAlister Graeme C,Coon Joshua J

Publisher

Springer Science and Business Media LLC

Subject

Cell Biology,Molecular Biology,Biochemistry,Biotechnology

Link

http://www.nature.com/articles/nmeth.1260.pdf

Reference29 articles.

1. Aebersold, R. & Mann, M. Mass spectrometry-based proteomics. Nature 422, 198–207 (2003).

2. Hunt, D.F., Yates, J.R., Shabanowitz, J., Winston, S. & Hauer, C.R. Protein sequencing by tandem mass spectrometry. Proc. Natl. Acad. Sci. USA 83, 6233–6237 (1986).

3. Coon, J.J., Syka, J.E.P., Shabanowitz, J. & Hunt, D.F. Tandem mass spectrometry for peptide and protein sequence analysis. Biotechniques 38, 519–523 (2005).

4. Washburn, M.P., Wolters, D. & Yates, J.R. Large-scale analysis of the yeast proteome by multidimensional protein identification technology. Nat. Biotechnol. 19, 242–247 (2001).

5. Peng, J., Elias, J.E., Thoreen, C.C., Licklider, L.J. & Gygi, S.P. Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome. J. Proteome Res. 2, 43–50 (2003).

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