Taxonomic composition and seasonal dynamics of the air microbiome in West Siberia

Author:

Gusareva Elena S.ORCID,Gaultier Nicolas P. E.,Premkrishnan Balakrishnan N. V.,Kee Carmon,Lim Serene Boon Yuean,Heinle Cassie E.,Purbojati Rikky W.,Nee Ang Poh,Lohar Sachin R.,Yanqing Koh,Kharkov Vladimir N.,Drautz-Moses Daniela I.,Stepanov Vadim A.,Schuster Stephan C.ORCID

Abstract

AbstractHere, we describe taxonomical composition, as well as seasonal and diel dynamics of airborne microbial communities in West Siberia. A total of 78 airborne biomass samples from 39 time intervals were analysed, within a temperature range of 48 °C (26 °C to − 22 °C). We observed a 5–170-fold decrease in DNA yield extracted from the airborne biomass in winter compared to summer, nevertheless, yielding sufficient material for metagenomic analysis. The airborne microbial communities included Actinobacteria and Proteobacteria, Ascomycota and Basidiomycota fungi as major components, as well as some Streptophyta plants. In summer, bacterial and fungal plant pathogens, and wood-rotting saprophytes were predominant. In winter, Ascomycota moulds and cold-related or stress environment bacterial species were enriched, while the fraction of wood-rotting and mushroom-forming Basidiomycota fungi was largely reduced. As recently reported for the tropical climate, the airborne microbial communities performed a diel cycle in summer, however, in winter diel dynamics were not observed.

Funder

Ministry of Education - Singapore

Russian Foundation of Basic Research

Publisher

Springer Science and Business Media LLC

Subject

Multidisciplinary

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