Find_tfSBP: find thermodynamics-feasible and smallest balanced pathways with high yield from large-scale metabolic networks
Author:
Publisher
Springer Science and Business Media LLC
Subject
Multidisciplinary
Link
http://www.nature.com/articles/s41598-017-17552-2.pdf
Reference28 articles.
1. Orth, J. D. et al. A comprehensive genome-scale reconstruction of Escherichia coli metabolism—2011. Molecular Systems Biology. 7, 535 (2011)
2. Becker, S. A. & Palsson, B. O. Genome-scale reconstruction of the metabolic network in Staphylococcus aureus N315: an initial draft to the two-dimensional annotation. BMC Microbiology. 5, Art. No. 8 (2005).
3. Ines, T., Vo Thuy, D., Price, N. D. & Palsson, B. O. Expanded metabolic reconstruction of Helicobacter pylori (iIT341 GSM/GPR): an in silico genome-scale characterization of single- and double-deletion mutants. Journal of Bacteriology. 187, 5818–5830 (2005).
4. Feist, A. M. et al. Modeling methanogenesis with a genomescale metabolic reconstruction of Methanosarcina barkeri. Molecular Systems Biology. 2, Art. No. 2006.0004 (2006).
5. Duarte, N. C., Herrgard, M. J. & Palsson, B. O. Reconstruction and validation of Saccharomyces cerevisiae iND750, a fully compartmentalized genome-scale metabolic model. Genome Research. 14, 1298–1309 (2004).
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