Identification of Daboia siamensis venome using integrated multi-omics data

Author:

Saethang Thammakorn,Somparn Poorichaya,Payungporn Sunchai,Sriswasdi Sira,Yee Khin Than,Hodge Kenneth,Knepper Mark A.,Chanhome Lawan,Khow Orawan,Chaiyabutr Narongsak,Sitprija Visith,Pisitkun Trairak

Abstract

AbstractSnakebite, classified by World Health Organization as a neglected tropical disease, causes more than 100,000 deaths and 2 million injuries per year. Currently, available antivenoms do not bind with strong specificity to target toxins, which means that severe complications can still occur despite treatment. Moreover, the cost of antivenom is expensive. Knowledge of venom compositions is fundamental for producing a specific antivenom that has high effectiveness, low side effects, and ease of manufacture. With advances in mass spectrometry techniques, venom proteomes can now be analyzed in great depth at high efficiency. However, these techniques require genomic and transcriptomic data for interpreting mass spectrometry data. This study aims to establish and incorporate genomics, transcriptomics, and proteomics data to study venomics of a venomous snake, Daboia siamensis. Multiple proteins that have not been reported as venom components of this snake such as hyaluronidase-1, phospholipase B, and waprin were discovered. Thus, multi-omics data are advantageous for venomics studies. These findings will be valuable not only for antivenom production but also for the development of novel therapeutics.

Funder

National Research Council of Thailand

Ratchadapisek Sompoch Endowment Fund

Ratchadaphiseksomphot Endowment Fund

Chulalongkorn Academic Advancement into Its 2nd Century Project

Thailand Science research and Innovation Fund Chulalongkorn University

National Institutes of Health

Publisher

Springer Science and Business Media LLC

Subject

Multidisciplinary

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