Author:
Le Elizabeth P. V.,Rundo Leonardo,Tarkin Jason M.,Evans Nicholas R.,Chowdhury Mohammed M.,Coughlin Patrick A.,Pavey Holly,Wall Chris,Zaccagna Fulvio,Gallagher Ferdia A.,Huang Yuan,Sriranjan Rouchelle,Le Anthony,Weir-McCall Jonathan R.,Roberts Michael,Gilbert Fiona J.,Warburton Elizabeth A.,Schönlieb Carola-Bibiane,Sala Evis,Rudd James H. F.
Abstract
AbstractRadiomics, quantitative feature extraction from radiological images, can improve disease diagnosis and prognostication. However, radiomic features are susceptible to image acquisition and segmentation variability. Ideally, only features robust to these variations would be incorporated into predictive models, for good generalisability. We extracted 93 radiomic features from carotid artery computed tomography angiograms of 41 patients with cerebrovascular events. We tested feature robustness to region-of-interest perturbations, image pre-processing settings and quantisation methods using both single- and multi-slice approaches. We assessed the ability of the most robust features to identify culprit and non-culprit arteries using several machine learning algorithms and report the average area under the curve (AUC) from five-fold cross validation. Multi-slice features were superior to single for producing robust radiomic features (67 vs. 61). The optimal image quantisation method used bin widths of 25 or 30. Incorporating our top 10 non-redundant robust radiomics features into ElasticNet achieved an AUC of 0.73 and accuracy of 69% (compared to carotid calcification alone [AUC: 0.44, accuracy: 46%]). Our results provide key information for introducing carotid CT radiomics into clinical practice. If validated prospectively, our robust carotid radiomic set could improve stroke prediction and target therapies to those at highest risk.
Funder
School of Clinical Medicine, University of Cambridge
Frank Edward Elmore Fund
Medical Research Council
The Mark Foundation for Cancer Research and Cancer Research UK (CRUK) Cambridge Centre
Wellcome Trust
National Institute for Health Research (NIHR) Imperial Biomedical Research Centre
British Heart Foundation Cambridge Centre of Research Excellence
The Dunhill Medical Trust
Royal College of Surgeons of England
British Heart Foundation
Cancer Research UK
AstraZeneca Oncology R
National Institute for Health Research
Leverhulme Trust
EPSRC
Wellcome Innovator Award
Horizon 2020
Cantab Capital Institute for the Mathematics of Information
Alan Turing Institute
NIHR Cambridge Biomedical Research Centre
Higher Education Funding Council for England
Publisher
Springer Science and Business Media LLC
Cited by
35 articles.
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