Overexpressed somatic alleles are enriched in functional elements in Breast Cancer
Author:
Publisher
Springer Science and Business Media LLC
Subject
Multidisciplinary
Link
http://www.nature.com/articles/s41598-017-08416-w.pdf
Reference77 articles.
1. Shlien, A. et al. Direct Transcriptional Consequences of Somatic Mutation in Breast Cancer. Cell Reports 16, 2032–2046 (2016).
2. Eswaran, J. et al. RNA sequencing of cancer reveals novel splicing alterations. Scientific reports 3, 1689 (2013).
3. Horvath, A. et al. Novel insights into breast cancer genetic variance through RNA sequencing. Scientific reports 3, 2256 (2013).
4. Fredriksson, N. J., Ny, L., Nilsson, J. A. & Larsson, E. Systematic analysis of noncoding somatic mutations and gene expression alterations across 14 tumor types. Nature Genetics 46, 1258–1263 (2014).
5. Lin, W. et al. Allelic expression imbalance polymorphisms in susceptibility chromosome regions and the risk and survival of breast cancer. Molecular Carcinogenesis 56, 300–311 (2017).
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2. Estimating allele-specific expression of SNVs from 10x Genomics Single-Cell RNA-Sequencing Data;2019-12-23
3. Systematic pan-cancer analysis of somatic allele frequency;Scientific Reports;2018-05-16
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