Interactive analysis and assessment of single-cell copy-number variations-Reference-Cited by-同舟云学术

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Interactive analysis and assessment of single-cell copy-number variations

Published:2015-09-07 Issue:11 Volume:12 Page:1058-1060
ISSN:1548-7091
Container-title:Nature Methods
language:en
Short-container-title:Nat Methods

Author:

Garvin Tyler,Aboukhalil Robert,Kendall Jude,Baslan Timour,Atwal Gurinder S,Hicks James,Wigler Michael,Schatz Michael C

Publisher

Springer Science and Business Media LLC

Subject

Cell Biology,Molecular Biology,Biochemistry,Biotechnology

Link

http://www.nature.com/articles/nmeth.3578.pdf

Reference29 articles.

1. Shapiro, E., Biezuner, T. & Linnarsson, S. Nat. Rev. Genet. 14, 618–630 (2013).

2. Wigler, M. Genome Med 4, 79 (2012).

3. McConnell, M.J. et al. Science 342, 632–637 (2013).

4. Blainey, P.C. FEMS Microbiol. Rev. 37, 407–427 (2013).

5. Wang, J., Fan, H.C., Behr, B. & Quake, S.R. Cell 150, 402–412 (2012).

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1. AMAR-seq: Automated Multimodal Sequencing of DNA Methylation, Chromatin Accessibility, and RNA Expression with Single-Cell Resolution;Analytical Chemistry;2024-09-09

2. Intercellular extrachromosomal DNA copy-number heterogeneity drives neuroblastoma cell state diversity;Cell Reports;2024-09

3. Improved allele-specific single-cell copy number estimation in low-coverage DNA-sequencing;Bioinformatics;2024-08

4. SCCNAInfer: a robust and accurate tool to infer the absolute copy number on scDNA-seq data;Bioinformatics;2024-07-01

5. DICE: Fast and Accurate Distance-Based Reconstruction of Single-Cell Copy Number Phylogenies;2024-06-04

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