A deep-learning algorithm to classify skin lesions from mpox virus infection

Author:

Thieme Alexander H.ORCID,Zheng Yuanning,Machiraju GautamORCID,Sadee ChrisORCID,Mittermaier MirjaORCID,Gertler MaximilianORCID,Salinas Jorge L.,Srinivasan Krithika,Gyawali Prashnna,Carrillo-Perez FranciscoORCID,Capodici AngeloORCID,Uhlig Maximilian,Habenicht DanielORCID,Löser Anastassia,Kohler MajaORCID,Schuessler MaximilianORCID,Kaul David,Gollrad Johannes,Ma JackieORCID,Lippert ChristophORCID,Billick KendallORCID,Bogoch Isaac,Hernandez-Boussard TinaORCID,Geldsetzer PascalORCID,Gevaert Olivier

Abstract

AbstractUndetected infection and delayed isolation of infected individuals are key factors driving the monkeypox virus (now termed mpox virus or MPXV) outbreak. To enable earlier detection of MPXV infection, we developed an image-based deep convolutional neural network (named MPXV-CNN) for the identification of the characteristic skin lesions caused by MPXV. We assembled a dataset of 139,198 skin lesion images, split into training/validation and testing cohorts, comprising non-MPXV images (n = 138,522) from eight dermatological repositories and MPXV images (n = 676) from the scientific literature, news articles, social media and a prospective cohort of the Stanford University Medical Center (n = 63 images from 12 patients, all male). In the validation and testing cohorts, the sensitivity of the MPXV-CNN was 0.83 and 0.91, the specificity was 0.965 and 0.898 and the area under the curve was 0.967 and 0.966, respectively. In the prospective cohort, the sensitivity was 0.89. The classification performance of the MPXV-CNN was robust across various skin tones and body regions. To facilitate the usage of the algorithm, we developed a web-based app by which the MPXV-CNN can be accessed for patient guidance. The capability of the MPXV-CNN for identifying MPXV lesions has the potential to aid in MPXV outbreak mitigation.

Funder

Bundesministerium für Wirtschaft und Technologie

Publisher

Springer Science and Business Media LLC

Subject

General Biochemistry, Genetics and Molecular Biology,General Medicine

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