Computational meta'omics for microbial community studies

Author:

Segata Nicola1,Boernigen Daniela12,Tickle Timothy L12,Morgan Xochitl C12,Garrett Wendy S2345,Huttenhower Curtis12

Affiliation:

1. Biostatistics Department, Harvard School of Public Health Boston MA USA

2. The Broad Institute of MIT and Harvard Cambridge MA USA

3. Department of Immunology and Infectious Diseases, Harvard School of Public Health Boston MA USA

4. Department of Medicine, Harvard Medical School Boston MA USA

5. Department of Medical Oncology, Dana‐Farber Cancer Institute Boston MA USA

Publisher

EMBO

Subject

Applied Mathematics,Computational Theory and Mathematics,General Agricultural and Biological Sciences,General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,Information Systems

Reference175 articles.

1. Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome

2. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

3. SmashCommunity: a metagenomic annotation and analysis tool: Fig. 1.

4. Induction of colonic regulatory T cells by indigenous Clostridium species;Atarashi K;Sci Signal,2011

5. The gut microbiota as an environmental factor that regulates fat storage;Backhed F;Sci Signal,2004

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