A flat embedding method for transmission electron microscopy reveals an unknown mechanism of tetracycline

Author:

Wenzel MichaelaORCID,Dekker Marien P.ORCID,Wang Biwen,Burggraaf Maroeska J.ORCID,Bitter Wilbert,van Weering Jan R. T.ORCID,Hamoen Leendert W.ORCID

Abstract

AbstractTransmission electron microscopy of cell sample sections is a popular technique in microbiology. Currently, ultrathin sectioning is done on resin-embedded cell pellets, which consumes milli- to deciliters of culture and results in sections of randomly orientated cells. This is problematic for rod-shaped bacteria and often precludes large-scale quantification of morphological phenotypes due to the lack of sufficient numbers of longitudinally cut cells. Here we report a flat embedding method that enables observation of thousands of longitudinally cut cells per single section and only requires microliter culture volumes. We successfully applied this technique to Bacillus subtilis, Escherichia coli, Mycobacterium bovis, and Acholeplasma laidlawii. To assess the potential of the technique to quantify morphological phenotypes, we monitored antibiotic-induced changes in B. subtilis cells. Surprisingly, we found that the ribosome inhibitor tetracycline causes membrane deformations. Further investigations showed that tetracycline disturbs membrane organization and localization of the peripheral membrane proteins MinD, MinC, and MreB. These observations are not the result of ribosome inhibition but constitute a secondary antibacterial activity of tetracycline that so far has defied discovery.

Funder

Amsterdam Infection and Immunity Institute (AIII), Amsterdam university Medical Centers, Amsterdam (UMC), Netherlands Postdoc stipend

China Scholarship Council

PhD fellowship from the Chinese Scholarship Council

Cancer Center Amsterdam (CCA), Amsterdam, The Natherlands; VUMC CCA Huijgens Program

Nederlandse Organisatie voor Wetenschappelijk Onderzoek

Publisher

Springer Science and Business Media LLC

Subject

General Agricultural and Biological Sciences,General Biochemistry, Genetics and Molecular Biology,Medicine (miscellaneous)

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