Significant variation between SNP-based HLA imputations in diverse populations: the last mile is the hardest-Reference-Cited by-同舟云学术

Significant variation between SNP-based HLA imputations in diverse populations: the last mile is the hardest

Published:2017-04-25 Issue:3 Volume:18 Page:367-376
ISSN:1470-269X
Container-title:The Pharmacogenomics Journal
language:en
Short-container-title:Pharmacogenomics J

Author:

Pappas D J,Lizee A,Paunic V,Beutner K R,Motyer A,Vukcevic D,Leslie S,Biesiada J,Meller J,Taylor K D,Zheng X,Zhao L P,Gourraud P-A,Hollenbach J A,Mack S J,Maiers M

Publisher

Springer Science and Business Media LLC

Subject

Pharmacology,Genetics,Molecular Medicine

Link

http://www.nature.com/articles/tpj20177.pdf

Reference48 articles.

1. Welter D, MacArthur J, Morales J, Burdett T, Hall P, Junkins H et al. The NHGRI GWAS Catalog, a curated resource of SNP-trait associations. Nucleic Acids Res 2014; 42: D1001–D1006.

2. Martin AM, Nolan D, Gaudieri S, Almeida CA, Nolan R, James I et al. Predisposition to abacavir hypersensitivity conferred by HLA-B*5701 and a haplotypic Hsp70-Hom variant. Proc Natl Acad Sci USA 2004; 101: 4180–4185.

3. Mallal S, Nolan D, Witt C, Masel G, Martin AM, Moore C et al. Association between presence of HLA-B*5701, HLA-DR7, and HLA-DQ3 and hypersensitivity to HIV-1 reverse-transcriptase inhibitor abacavir. Lancet 2002; 359: 727–732.

4. Hung SI, Chung WH, Liou LB, Chu CC, Lin M, Huang HP et al. HLA-B*5801 allele as a genetic marker for severe cutaneous adverse reactions caused by allopurinol. Proc Natl Acad Sci USA 2005; 102: 4134–4139.

5. McCormack M, Alfirevic A, Bourgeois S, Farrell JJ, Kasperaviciute D, Carrington M et al. HLA-A*3101 and carbamazepine-induced hypersensitivity reactions in Europeans. N Engl J Med 2011; 364: 1134–1143.

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