Assessing single-cell transcriptomic variability through density-preserving data visualization-Reference-Cited by-同舟云学术

登录注册会员服务联系我们

Assessing single-cell transcriptomic variability through density-preserving data visualization

Published:2021-01-18 Issue:6 Volume:39 Page:765-774
ISSN:1087-0156
Container-title:Nature Biotechnology
language:en
Short-container-title:Nat Biotechnol

Author:

Narayan Ashwin^ORCID,Berger Bonnie^ORCID,Cho Hyunghoon^ORCID

Funder

U.S. Department of Health & Human Services | National Institutes of Health

H.C. is partially supported by Eric and Wendy Schmidt through the Schmidt Fellows Program at the Broad Institute.

Publisher

Springer Science and Business Media LLC

Subject

Biomedical Engineering,Molecular Medicine,Applied Microbiology and Biotechnology,Bioengineering,Biotechnology

Link

http://www.nature.com/articles/s41587-020-00801-7.pdf

Reference50 articles.

1. Hie, B. et al. Computational methods for single-cell RNA sequencing. Ann. Rev. Biomed. Data Sci. 3, 339–364 (2020).

2. Chen, G., Ning, B. & Shi, T. Single-cell RNA-seq technologies and related computational data analysis. Front. Genet. 10, 317 (2019).

3. van der Maaten, L. & Hinton, G. Visualizing data using t-SNE. J. Mach. Learn. Res. 9, 2579–2605 (2008).

4. McInnes, L. & Healy, J. UMAP: uniform manifold approximation and projection for dimension reduction. Preprint at https://arxiv.org/abs/1802.03426 (2018).

5. Amir, E.-aD. et al. viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia. Nat. Biotechnol. 31, 545–552 (2013).

Cited by 93 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Topological Data Analysis in smart manufacturing: State of the art and future directions;Journal of Manufacturing Systems;2024-10

2. scBubbletree: computational approach for visualization of single cell RNA-seq data;BMC Bioinformatics;2024-09-13

3. Integrated multi-omic high-throughput strategies across-species identified potential key diagnostic, prognostic, and therapeutic targets for atherosclerosis under high glucose conditions;Molecular and Cellular Biochemistry;2024-09-02

4. A multi-modal framework improves prediction of tissue-specific gene expression from a surrogate tissue;eBioMedicine;2024-09

5. Single-cell RNA sequencing and bulk sequencing reveal the immunosuppressive role of malignant cells in triple-negative breast cancer;Gene Reports;2024-09

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号京ICP备18003416号-3