Quantification of absolute transcription factor binding affinities in the native chromatin context using BANC-seq-Reference-Cited by-同舟云学术

Quantification of absolute transcription factor binding affinities in the native chromatin context using BANC-seq

Published:2023-03-27 Issue:12 Volume:41 Page:1801-1809
ISSN:1087-0156
Container-title:Nature Biotechnology
language:en
Short-container-title:Nat Biotechnol

Author:

Neikes Hannah K.,Kliza Katarzyna W.^ORCID,Gräwe Cathrin^ORCID,Wester Roelof A.,Jansen Pascal W. T. C.,Lamers Lieke A.,Baltissen Marijke P.,van Heeringen Simon J.,Logie Colin,Teichmann Sarah A.^ORCID,Lindeboom Rik G. H.^ORCID,Vermeulen Michiel^ORCID

Publisher

Springer Science and Business Media LLC

Subject

Biomedical Engineering,Molecular Medicine,Applied Microbiology and Biotechnology,Bioengineering,Biotechnology

Link

https://www.nature.com/articles/s41587-023-01715-w.pdf

Reference65 articles.

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2. Lappalainen, T. Functional genomics bridges the gap between quantitative genetics and molecular biology. Genome Res. 25, 1427–1431 (2015).

3. Serebreni, L. & Stark, A. Insights into gene regulation: from regulatory genomic elements to DNA–protein and protein–protein interactions. Curr. Opin. Cell Biol. 70, 58–66 (2021).

4. Buenrostro, J. D., Wu, B., Chang, H. Y. & Greenleaf, W. J. ATAC-seq: a method for assaying chromatin accessibility genome-wide. Curr. Protoc. Mol. Biol. 109, 21.29.1–21.29.9 (2015).

5. Skene, P. J. & Henikoff, S. An efficient targeted nuclease strategy for high-resolution mapping of DNA binding sites. eLife 6, e21856 (2017).

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