Multiscale PHATE identifies multimodal signatures of COVID-19
-
Published:2022-02-28
Issue:5
Volume:40
Page:681-691
-
ISSN:1087-0156
-
Container-title:Nature Biotechnology
-
language:en
-
Short-container-title:Nat Biotechnol
Author:
Kuchroo Manik, Huang Jessie, Wong Patrick, Grenier Jean-Christophe, Shung Dennis, Tong AlexanderORCID, Lucas CarolinaORCID, Klein JonORCID, Burkhardt Daniel B.ORCID, Gigante ScottORCID, Godavarthi Abhinav, Rieck BastianORCID, Israelow BenjaminORCID, Simonov Michael, Mao TianyangORCID, Oh Ji Eun, Silva Julio, Takahashi TakehiroORCID, Odio Camila D., Casanovas-Massana Arnau, Fournier John, Obaid Abeer, Moore Adam, Lu-Culligan Alice, Nelson Allison, Brito Anderson, Nunez Angela, Martin Anjelica, Wyllie Anne L., Watkins Annie, Park Annsea, Venkataraman Arvind, Geng Bertie, Kalinich Chaney, Vogels Chantal B. F., Harden Christina, Todeasa Codruta, Jensen Cole, Kim Daniel, McDonald David, Shepard Denise, Courchaine Edward, White Elizabeth B., Song Eric, Silva Erin, Kudo Eriko, DeIuliis Giuseppe, Wang Haowei, Rahming Harold, Park Hong-Jai, Matos Irene, Ott Isabel M., Nouws Jessica, Valdez Jordan, Fauver Joseph, Lim Joseph, Rose Kadi-Ann, Anastasio Kelly, Brower Kristina, Glick Laura, Sharma Lokesh, Sewanan Lorenzo, Knaggs Lynda, Minasyan Maksym, Batsu Maria, Tokuyama Maria, Muenker M. Cate, Petrone Mary, Kuang Maxine, Nakahata Maura, Campbell Melissa, Linehan Melissa, Askenase Michael H., Simonov Michael, Smolgovsky Mikhail, Grubaugh Nathan D., Sonnert Nicole, Naushad Nida, Vijayakumar Pavithra, Lu Peiwen, Earnest Rebecca, Martinello Rick, Herbst Roy, Datta Rupak, Handoko Ryan, Bermejo Santos, Lapidus Sarah, Prophet Sarah, Bickerton Sean, Velazquez Sofia, Mohanty Subhasis, Alpert Tara, Rice Tyler, Schulz Wade, Khoury-Hanold William, Peng Xiaohua, Yang Yexin, Cao Yiyun, Strong Yvette, Farhadian ShelliORCID, Dela Cruz Charles S., Ko Albert I.ORCID, Hirn Matthew J.ORCID, Wilson F. Perry, Hussin Julie G.ORCID, Wolf GuyORCID, Iwasaki AkikoORCID, Krishnaswamy SmitaORCID,
Publisher
Springer Science and Business Media LLC
Subject
Biomedical Engineering,Molecular Medicine,Applied Microbiology and Biotechnology,Bioengineering,Biotechnology
Reference52 articles.
1. Klein, A. M. et al. Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells. Cell 161, 1187–1201 (2015). 2. Macosko, E. Z. et al. Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets. Cell 161, 1202–1214 (2015). 3. Buenrostro, J. D. et al. Single-cell chromatin accessibility reveals principles of regulatory variation. Nature 523, 486–490 (2015). 4. van der Maaten, L. & Hinton, G. Visualizing high-dimensional data using t-SNE. J. Mach. Learn. Res. 9, 2579–2605 (2008). 5. Becht, E. et al. Dimensionality reduction for visualizing single-cell data using UMAP. Nat. Biotechnol. 37, 38 (2019).
Cited by
46 articles.
订阅此论文施引文献
订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献
|
|