Genome-wide analysis of cis-regulatory changes underlying metabolic adaptation of cavefish-Reference-Cited by-同舟云学术

Genome-wide analysis of cis-regulatory changes underlying metabolic adaptation of cavefish

Published:2022-05 Issue:5 Volume:54 Page:684-693
ISSN:1061-4036
Container-title:Nature Genetics
language:en
Short-container-title:Nat Genet

Author:

Krishnan Jaya^ORCID,Seidel Chris W.,Zhang Ning,Singh Narendra Pratap,VanCampen Jake,Peuß Robert,Xiong Shaolei,Kenzior Alexander,Li Hua,Conaway Joan W.^ORCID,Rohner Nicolas^ORCID

Publisher

Springer Science and Business Media LLC

Subject

Genetics

Link

https://www.nature.com/articles/s41588-022-01049-4.pdf

Reference63 articles.

1. Wittkopp, P. J. & Kalay, G. Cis-regulatory elements: molecular mechanisms and evolutionary processes underlying divergence. Nat. Rev. Genet. 13, 59–69 (2012).

2. Long, H. K., Prescott, S. L. & Wysocka, J. Ever-changing landscapes: transcriptional enhancers in development and evolution. Cell 167, 1170–1187 (2016).

3. Prescott, S. L. et al. Enhancer divergence and cis-regulatory evolution in the human and chimp neural crest. Cell 163, 68–83 (2015).

4. Thompson, A. C. et al. A novel enhancer near the Pitx1 gene influences development and evolution of pelvic appendages in vertebrates. eLife 7, e38555 (2018).

5. Partha, R. et al. Subterranean mammals show convergent regression in ocular genes and enhancers, along with adaptation to tunneling. eLife 6, e25884 (2017).

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