RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes-Reference-Cited by-同舟云学术

RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes

Published:2015-02-10 Issue:1 Volume:5 Page:
ISSN:2045-2322
Container-title:Scientific Reports
language:en
Short-container-title:Sci Rep

Author:

Brettin Thomas,Davis James J.,Disz Terry,Edwards Robert A.,Gerdes Svetlana,Olsen Gary J.,Olson Robert,Overbeek Ross,Parrello Bruce,Pusch Gordon D.,Shukla Maulik,Thomason James A.,Stevens Rick,Vonstein Veronika,Wattam Alice R.,Xia Fangfang

Publisher

Springer Science and Business Media LLC

Subject

Multidisciplinary

Link

http://www.nature.com/articles/srep08365.pdf

Reference40 articles.

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3. Overbeek, R. et al. The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST). Nucleic Acids Res. gkt1226 (2013).

4. Aziz, R. K. et al. The RAST Server: rapid annotations using subsystems technology. BMC Genomics. 9, 75 (2008).

5. Overbeek, R. et al. The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes. Nucleic Acids Res. 33, 5691–5702 (2005).

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