Light-Seq: from microscopy to transcriptomics and back
Author:
Publisher
Springer Science and Business Media LLC
Subject
Cell Biology,Molecular Biology,Biochemistry,Biotechnology
Link
https://www.nature.com/articles/s41592-022-01608-x.pdf
Reference5 articles.
1. Moses, L. & Pachter, L. Museum of spatial transcriptomics. Nat. Methods 19, 534–546 (2022). This review surveys the spatial transcriptomics methods landscape.
2. Nakamura, S., Kawabata, H. & Fujimoto, K. Double duplex invasion of DNA induced by ultrafast photo-cross-linking using 3-cyanovinylcarbazole for antigene methods. Chem. Commun. 53, 7616–7619 (2017). This paper reports light-directed DNA labeling by the ultrafast photocrosslinking chemistry that we use for Light-Seq barcoding.
3. Singh-Gasson, S. et al. Maskless fabrication of light-directed oligonucleotide microarrays using a digital micromirror array. Nat. Biotechnol. 17, 974–978 (1999). This paper describes the use of a digital micromirror array for the maskless fabrication of an oligonucleotide microarray.
4. Gustincich, S., Feigenspan, A., Wu, D. K., Koopman, L. J. & Raviola, E. Control of dopamine release in the retina: a transgenic approach to neural networks. Neuron 18, 723–736 (1997). This paper describes the morphology and function of the rare dopaminergic amacrine cell subtype.
5. Moen, E. et al. Deep learning for cellular image analysis. Nat. Methods 16, 1233–1246 (2019). This review discusses the intersection between deep learning and cellular image analysis.
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