Unfolding and Translocation of Knotted Proteins by Clp Biological Nanomachines: Synergistic Contribution of Primary Sequence and Topology Revealed by Molecular Dynamics Simulations-Reference-Cited by-同舟云学术

Unfolding and Translocation of Knotted Proteins by Clp Biological Nanomachines: Synergistic Contribution of Primary Sequence and Topology Revealed by Molecular Dynamics Simulations

Published:2021-06-10 Issue:27 Volume:125 Page:7335-7350
ISSN:1520-6106
Container-title:The Journal of Physical Chemistry B
language:en
Short-container-title:J. Phys. Chem. B

Author:

Fonseka Hewafonsekage Yasan Y.¹,Javidi Alex²,Oliveira Luiz F. L.¹,Micheletti Cristian³^ORCID,Stan George¹^ORCID

Affiliation:

1. Department of Chemistry, University of Cincinnati, Cincinnati, Ohio 45221, United States

2. Data Sciences, Janssen Research and Development, Spring House, Pennsylvania 19477, United States

3. Molecular and Statistical Biophysics, Scuola Internazionale Superiore di Studi Avanzati (SISSA), 34136 Trieste, Italy

Funder

Division of Molecular and Cellular Biosciences

Publisher

American Chemical Society (ACS)

Subject

Materials Chemistry,Surfaces, Coatings and Films,Physical and Theoretical Chemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jpcb.1c00898

Reference102 articles.

1. Posttranslational Quality Control: Folding, Refolding, and Degrading Proteins

2. ClpXP, an ATP-powered unfolding and protein-degradation machine

3. Structure and Function of the 26S Proteasome

4. Proteomic Discovery of Cellular Substrates of the ClpXP Protease Reveals Five Classes of ClpX-Recognition Signals

5. Loops in the Central Channel of ClpA Chaperone Mediate Protein Binding, Unfolding, and Translocation

Cited by 11 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Knot or not? Identifying unknotted proteins in knotted families with sequence‐based Machine Learning model;Protein Science;2024-06-18

2. AlphaKnot 2.0: a web server for the visualization of proteins’ knotting and a database of knotted AlphaFold-predicted models;Nucleic Acids Research;2024-06-06

3. Structure, dynamics, and stability of the smallest and most complex 71 protein knot;Journal of Biological Chemistry;2024-01

4. Folding and functions of knotted proteins;Current Opinion in Structural Biology;2023-12

5. A Marcus-Type Inverted Region in the Translocation Kinetics of a Knotted Protein;The Journal of Physical Chemistry Letters;2023-11-27