Multibody Terms in Protein Coarse-Grained Models: A Top-Down Perspective-Reference-Cited by-同舟云学术

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Multibody Terms in Protein Coarse-Grained Models: A Top-Down Perspective

Published:2023-07-27 Issue:31 Volume:127 Page:6920-6927
ISSN:1520-6106
Container-title:The Journal of Physical Chemistry B
language:en
Short-container-title:J. Phys. Chem. B

Author:

Zaporozhets Iryna¹²³,Clementi Cecilia¹²³^ORCID

Affiliation:

1. Department of Chemistry, Rice University, 6100 Main Street, Houston, Texas 77005, United States

2. Center for Theoretical Biological Physics, Rice University, 6100 Main Street, Houston, Texas 77005, United States

3. Department of Physics, Freie Universität, Arnimallee 12, Berlin 14195, Germany

Funder

Division of Chemistry

Deutsche Forschungsgemeinschaft

Einstein Stiftung Berlin

Division of Physics

Publisher

American Chemical Society (ACS)

Subject

Materials Chemistry,Surfaces, Coatings and Films,Physical and Theoretical Chemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jpcb.3c04493

Reference64 articles.

1. THEORY OF PROTEIN FOLDING: The Energy Landscape Perspective

2. Low-dimensional, free-energy landscapes of protein-folding reactions by nonlinear dimensionality reduction

3. Coarse-grained models of protein folding: toy models or predictive tools?

4. Collective variables for the study of long-time kinetics from molecular trajectories: theory and methods

5. The Dynamics of Subunit Rotation in a Eukaryotic Ribosome

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1. Transferable Implicit Solvation via Contrastive Learning of Graph Neural Networks;ACS Central Science;2023-11-16

2. Transferable Coarse Graining via Contrastive Learning of Graph Neural Networks;2023-09-12

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