Mechanism of Facilitated Diffusion during a DNA Search in Crowded Environments-Reference-Cited by-同舟云学术

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Mechanism of Facilitated Diffusion during a DNA Search in Crowded Environments

Published:2016-10-25 Issue:43 Volume:120 Page:11113-11122
ISSN:1520-6106
Container-title:The Journal of Physical Chemistry B
language:en
Short-container-title:J. Phys. Chem. B

Author:

Krepel Dana¹,Gomez David²,Klumpp Stefan²³,Levy Yaakov¹

Affiliation:

1. Department of Structural Biology, Weizmann Institute of Science, Rehovot 76100, Israel

2. Max Planck Institute of Colloids and Interfaces, Science Park Golm, 14424 Potsdam, Germany

3. Institute for Nonlinear Dynamics, Georg-August University Göttingen, Friedrich-Hund-Platz 1, 37077 Göttingen, Germany

Funder

Bundesministerium für Bildung und Forschung

Minerva Foundation

Weizmann Institute of Science

Kimmelman Center for Macromolecular Assemblies

Publisher

American Chemical Society (ACS)

Subject

Materials Chemistry,Surfaces, Coatings and Films,Physical and Theoretical Chemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jpcb.6b07813

Reference70 articles.

1. Diffusion-driven mechanisms of protein translocation on nucleic acids. 1. Models and theory

2. Kinetics of Protein-DNA Interaction: Facilitated Target Location in Sequence-Dependent Potential

3. An end to 40 years of mistakes in DNA–protein association kinetics?

4. From The Cover: Measurement of the contributions of 1D and 3D pathways to the translocation of a protein along DNA

5. Protein Sliding along DNA: Dynamics and Structural Characterization

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1. Protein Diffusion Along Protein and DNA Lattices: Role of Electrostatics and Disordered Regions;Annual Review of Biophysics;2023-05-09

2. Influence of Nonspecific Interactions between Proteins and In Vivo Cytoplasmic Crowders in Facilitated Diffusion of Proteins: Theoretical Insights;The Journal of Physical Chemistry B;2022-04-19

3. Crowding competes with trapping to enhance interfacial diffusion;The European Physical Journal Plus;2022-03-17

4. Theoretical insights into the full description of DNA target search by subdiffusing proteins;Physical Chemistry Chemical Physics;2022

5. Theoretical study of the role of dynamic bulk crowders in the protein search for targets on DNA;Journal of Statistical Mechanics: Theory and Experiment;2021-07-01

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