Phosphorothioate Substitutions in RNA Structure Studied by Molecular Dynamics Simulations, QM/MM Calculations, and NMR Experiments-Reference-Cited by-同舟云学术

Phosphorothioate Substitutions in RNA Structure Studied by Molecular Dynamics Simulations, QM/MM Calculations, and NMR Experiments

Published:2021-01-20 Issue:3 Volume:125 Page:825-840
ISSN:1520-6106
Container-title:The Journal of Physical Chemistry B
language:en
Short-container-title:J. Phys. Chem. B

Author:

Zhang Zhengyue¹²^ORCID,Vögele Jennifer³,Mráziková Klaudia²⁴,Kruse Holger⁴^ORCID,Cang Xiaohui⁵,Wöhnert Jens³,Krepl Miroslav⁴^ORCID,Šponer Jiří¹⁴^ORCID

Affiliation:

1. CEITEC−Central European Institute of Technology, Masaryk University, Kamenice 5, 625 00 Brno, Czech Republic

2. Faculty of Science, Masaryk University, Kotlarska 2, 602 00 Brno, Czech Republic

3. Institute of Molecular Biosciences and Center for Biomolecular Magnetic Resonance (BMRZ), Goethe-University Frankfurt, Max-von-Laue-Straße 9, 60438 Frankfurt, Germany

4. Institute of Biophysics of the Czech Academy of Sciences, Kralovopolska 135, 612 65 Brno, Czech Republic

5. Institute of Genetics, Zhejiang University, Hangzhou, Zhejiang 310058, China

Funder

European Regional Development Fund

Grantová Agentura Ceské Republiky

Publisher

American Chemical Society (ACS)

Subject

Materials Chemistry,Surfaces, Coatings and Films,Physical and Theoretical Chemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jpcb.0c10192

Reference85 articles.

1. The chemical diversity of RNA modifications

2. Chemical Modification of Aptamers for Increased Binding Affinity in Diagnostic Applications: Current Status and Future Prospects

3. MODOMICS: a database of RNA modification pathways. 2017 update

4. The chemical evolution of oligonucleotide therapies of clinical utility

5. Antisense Recognition of the HER-2 mRNA: Effects of Phosphorothioate Substitution and Polyamines on DNA·RNA, RNA·RNA, and DNA·DNA Duplex Stability

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