Solvent Accessibility Promotes Rotamer Errors during Protein Modeling with Major Side-Chain Prediction Programs-Reference-Cited by-同舟云学术

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Solvent Accessibility Promotes Rotamer Errors during Protein Modeling with Major Side-Chain Prediction Programs

Published:2023-07-06 Issue:14 Volume:63 Page:4405-4422
ISSN:1549-9596
Container-title:Journal of Chemical Information and Modeling
language:en
Short-container-title:J. Chem. Inf. Model.

Author:

Hameduh Tareq¹^ORCID,Mokry Michal¹,Miller Andrew D.¹²³,Heger Zbynek¹,Haddad Yazan¹^ORCID

Affiliation:

1. Department of Chemistry and Biochemistry, Mendel University in Brno, Zemědělská 1665/1, CZ-613 00 Brno, Czech Republic

2. Veterinary Research Institute, Hudcova 296/70, CZ-621 00 Brno, Czech Republic

3. KP Therapeutics (Europe) s.r.o., Purkyňova 649/127, CZ-612 00 Brno, Czech Republic

Funder

Agentura Pro Zdravotnick? V?zkum Cesk? Republiky

European Regional Development Fund

Grantov? Agentura Cesk? Republiky

Mendelova Univerzita v Brne

Publisher

American Chemical Society (ACS)

Subject

Library and Information Sciences,Computer Science Applications,General Chemical Engineering,General Chemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.3c00134

Reference35 articles.

1. Homology modeling in the time of collective and artificial intelligence

2. Deep Learning-Based Advances in Protein Structure Prediction

3. Protein sequence‐to‐structure learning: Is this the end(‐to‐end revolution)?

4. Assessment of protein model structure accuracy estimation in CASP14 : Old and new challenges

5. AlphaFold2 and the future of structural biology

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