CavVis—A Field-of-View Geometric Algorithm for Protein Cavity Detection
Author:
Affiliation:
1. Instituto de Telecomunicações, Delegação da Covilhã, 6200-001 Covilhã, Portugal
2. Departamento de Informática, Universidade da Beira Interior, 6200-001 Covilhã, Portugal
Funder
Funda??o para a Ci?ncia e a Tecnologia
Publisher
American Chemical Society (ACS)
Subject
Library and Information Sciences,Computer Science Applications,General Chemical Engineering,General Chemistry
Link
https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.8b00572
Reference45 articles.
1. Insights into Protein–Ligand Interactions: Mechanisms, Models, and Methods
2. A geometric approach to macromolecule-ligand interactions
3. Molecular docking using shape descriptors
4. Multi-GPU-based detection of protein cavities using critical points
5. Geometric Detection Algorithms for Cavities on Protein Surfaces in Molecular Graphics: A Survey
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1. CageCavityCalc (C3): A Computational Tool for Calculating and Visualizing Cavities in Molecular Cages;Journal of Chemical Information and Modeling;2024-07-09
2. CRAFT: a web-integrated cavity prediction tool based on flow transfer algorithm;Journal of Cheminformatics;2024-01-30
3. CavFind: A Novel Algorithm to Detect Cavities on Protein Structure;Lecture Notes in Networks and Systems;2024
4. VAPPD: Visual Analysis of Protein Pocket Dynamics;Applied Sciences;2022-10-17
5. PNMAVis: Visual Analysis Tool of Protein Normal Mode for Understanding Cavity Dynamics;Applied Sciences;2022-08-07
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