Web-ARM: A Web-Based Interface for the Automatic Construction of QM/MM Models of Rhodopsins-Reference-Cited by-同舟云学术

Web-ARM: A Web-Based Interface for the Automatic Construction of QM/MM Models of Rhodopsins

Published:2020-01-07 Issue:3 Volume:60 Page:1481-1493
ISSN:1549-9596
Container-title:Journal of Chemical Information and Modeling
language:en
Short-container-title:J. Chem. Inf. Model.

Author:

Pedraza-González Laura¹^ORCID,Marín María Del Carmen¹^ORCID,Jorge Alejandro N.²^ORCID,Ruck Tyler D.²^ORCID,Yang Xuchun²^ORCID,Valentini Alessio³^ORCID,Olivucci Massimo¹²^ORCID,De Vico Luca¹^ORCID

Affiliation:

1. Department of Biotechnology, Chemistry and Pharmacy, Università degli Studi di Siena, Via A. Moro 2, I-53100 Siena, Italy

2. Department of Chemistry, Bowling Green State University, Bowling Green, Ohio 43403, United States of America

3. Theoretical Physical Chemistry, Research Unit MolSys, Université de Liège, Allée du 6 Août, 11, 4000 Liège, Belgium

Funder

National Science Foundation

Universit?? degli Studi di Siena

Ministero dell???Istruzione, dell???Universit?? e della Ricerca

Fonds De La Recherche Scientifique - FNRS

U.S. Department of Health and Human Services

Publisher

American Chemical Society (ACS)

Subject

Library and Information Sciences,Computer Science Applications,General Chemical Engineering,General Chemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.9b00615

Reference51 articles.

1. Microbial and Animal Rhodopsins: Structures, Functions, and Molecular Mechanisms

2. Retinylidene Proteins: Structures and Functions from Archaea to Humans

3. Origin of the Reactive and Nonreactive Excited States in the Primary Reaction of Rhodopsins: pH Dependence of Femtosecond Absorption of Light-Driven Sodium Ion Pump Rhodopsin KR2

4. The Molecular Mechanism of Thermal Noise in Rod Photoreceptors

5. Comparison of the isomerization mechanisms of human melanopsin and invertebrate and vertebrate rhodopsins

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