Coarse-Grained Modeling of Multiple Pathways in Conformational Transitions of Multi-Domain Proteins-Reference-Cited by-同舟云学术

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Coarse-Grained Modeling of Multiple Pathways in Conformational Transitions of Multi-Domain Proteins

Published:2021-05-06 Issue:5 Volume:61 Page:2427-2443
ISSN:1549-9596
Container-title:Journal of Chemical Information and Modeling
language:en
Short-container-title:J. Chem. Inf. Model.

Author:

Shinobu Ai¹,Kobayashi Chigusa²^ORCID,Matsunaga Yasuhiro³,Sugita Yuji¹²⁴^ORCID

Affiliation:

1. Laboratory for Biomolecular Function Simulation, RIKEN Center for Biosystems Dynamics Research, Kobe, Hyogo 650-0047, Japan

2. Computational Biophysics Research Team, RIKEN Center for Computational Science, Kobe, Hyogo 650-0047, Japan

3. Graduate School of Science and Engineering, Saitama University, Saitama 338-8570, Japan

4. Theoretical Molecular Science Laboratory, RIKEN Cluster for Pioneering Research, Wako, Saitama 351-0198, Japan

Funder

Japan Society for the Promotion of Science

Publisher

American Chemical Society (ACS)

Subject

Library and Information Sciences,Computer Science Applications,General Chemical Engineering,General Chemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.1c00286

Reference139 articles.

1. Dynamics of ligand binding to myoglobin

2. The Energy Landscapes and Motions of Proteins

3. Nonlinear elasticity, proteinquakes, and the energy landscapes of functional transitions in proteins

4. Illuminating the mechanistic roles of enzyme conformational dynamics

5. Intrinsic motions along an enzymatic reaction trajectory

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