Evaluation of DDA Library-Free Strategies for Phosphoproteomics and Ubiquitinomics Data-Independent Acquisition Data-Reference-Cited by-同舟云学术

Evaluation of DDA Library-Free Strategies for Phosphoproteomics and Ubiquitinomics Data-Independent Acquisition Data

Published:2023-05-31 Issue:7 Volume:22 Page:2232-2245
ISSN:1535-3893
Container-title:Journal of Proteome Research
language:en
Short-container-title:J. Proteome Res.

Author:

Wen Chengwen¹,Wu Xiurong¹,Lin Guanzhong¹,Yan Wei¹,Gan Guohong¹,Xu Xiao¹,Chen Xiang-Yu¹,Chen Xi²,Liu Xianming³,Fu Guo⁴,Zhong Chuan-Qi¹^ORCID

Affiliation:

1. State Key Laboratory of Cellular Stress Biology, School of Life Sciences, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen 361005, Fujian, China

2. SpecAlly Life Technology Co., Ltd., Wuhan 430074, Hubei, China

3. Shanghai Cancer Center and Institutes of Biomedical Sciences, Fudan University, Shanghai 200030, China

4. School of Medicine, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen 361005, Fujian, China

Funder

Fundamental Research Funds for the Central Universities

National Natural Science Foundation of China

Publisher

American Chemical Society (ACS)

Subject

General Chemistry,Biochemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jproteome.2c00735

Reference36 articles.

1. Mapping protein post-translational modifications with mass spectrometry

2. Rapid and In-Depth Coverage of the (Phospho-)Proteome With Deep Libraries and Optimal Window Design for dia-PASEF

3. Phosphoproteome profiling uncovers a key role for CDKs in TNF signaling

4. A data-independent acquisition-based global phosphoproteomics system enables deep profiling

5. Rapid and site-specific deep phosphoproteome profiling by data-independent acquisition without the need for spectral libraries

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