Repeat-Preserving Decoy Database for False Discovery Rate Estimation in Peptide Identification-Reference-Cited by-同舟云学术

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Repeat-Preserving Decoy Database for False Discovery Rate Estimation in Peptide Identification

Published:2020-02-03 Issue:3 Volume:19 Page:1029-1036
ISSN:1535-3893
Container-title:Journal of Proteome Research
language:en
Short-container-title:J. Proteome Res.

Author:

Moosa Johra Muhammad¹^ORCID,Guan Shenheng¹²,Moran Michael F.²³,Ma Bin¹

Affiliation:

1. David R. Cheriton School of Computer Science, University of Waterloo, Waterloo N2L 3G1, Canada

2. Program in Cell Biology and SPARC BioCentre, Hospital for Sick Children, 686 Bay St, Toronto, Ontario M5G 0A4, Canada

3. Department of Molecular Genetics, University of Toronto, 686 Bay St, Toronto, Ontario M5G 0A4, Canada

Funder

Canada Foundation for Innovation

Ontario Genomics

Canada Research Chairs

Genome Canada

Natural Sciences and Engineering Research Council of Canada

Pan-Canadian Proteomics Center

Publisher

American Chemical Society (ACS)

Subject

General Chemistry,Biochemistry

Link

http://pubs.acs.org/doi/pdf/10.1021/acs.jproteome.9b00555

Reference33 articles.

1. Probability-based protein identification by searching sequence databases using mass spectrometry data

2. Probability-Based Validation of Protein Identifications Using a Modified SEQUEST Algorithm

3. TANDEM: matching proteins with tandem mass spectra

4. Open Mass Spectrometry Search Algorithm

5. Comet: An open-source MS/MS sequence database search tool

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