Development of Physics-Based Energy Functions that Predict Medium-Resolution Structures for Proteins of the α, β, and α/β Structural Classes-Reference-Cited by-同舟云学术

Development of Physics-Based Energy Functions that Predict Medium-Resolution Structures for Proteins of the α, β, and α/β Structural Classes

Published:2001-07-03 Issue:30 Volume:105 Page:7299-7311
ISSN:1520-6106
Container-title:The Journal of Physical Chemistry B
language:en
Short-container-title:J. Phys. Chem. B

Author:

Pillardy Jarosław¹,Czaplewski Cezary¹,Liwo Adam¹,Wedemeyer William J.¹,Lee Jooyoung¹,Ripoll Daniel R.¹,Arłukowicz Piotr¹,Ołdziej Stanisław¹,Arnautova Yelena A.¹,Scheraga Harold A.¹

Affiliation:

1. Baker Laboratory of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853-1301, Faculty of Chemistry, University of Gdańsk, Sobieskiego 18, 80-952 Gdańsk, Poland, and Cornell Theory Center, Ithaca, New York 14853-3801

Publisher

American Chemical Society (ACS)

Subject

Materials Chemistry,Surfaces, Coatings and Films,Physical and Theoretical Chemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/jp0111012

Reference42 articles.

1. Prediction of protein conformation on the basis of a search for compact structures: Test on avian pancreatic polypeptide

2. A united-residue force field for off-lattice protein-structure simulations. I. Functional forms and parameters of long-range side-chain interaction potentials from protein crystal data

3. A united-residue force field for off-lattice protein-structure simulations. II. Parameterization of short-range interactions and determination of weights of energy terms by Z-score optimization

4. United-residue force field for off-lattice protein-structure simulations: III. Origin of backbone hydrogen-bonding cooperativity in united-residue potentials

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