Double-Metal-Ion/Single-Metal-Ion Mechanisms of the Cleavage Reaction of Ribozymes: First-Principles Molecular Dynamics Simulations of a Fully Hydrated Model System-Reference-Cited by-同舟云学术

Double-Metal-Ion/Single-Metal-Ion Mechanisms of the Cleavage Reaction of Ribozymes: First-Principles Molecular Dynamics Simulations of a Fully Hydrated Model System

Published:2005-07-07 Issue:5 Volume:1 Page:925-934
ISSN:1549-9618
Container-title:Journal of Chemical Theory and Computation
language:en
Short-container-title:J. Chem. Theory Comput.

Author:

Boero Mauro¹,Tateno Masaru¹,Terakura Kiyoyuki¹,Oshiyama Atsushi¹

Affiliation:

1. Institute of Physics, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8571, Japan, Center for Biological Resources and Informatics, Tokyo Institute of Technology, Nagatsuta 4259, Midori-ku, Yokohama 226-8501, Japan, Division of Frontier Research, Creative Research Initiative “Sousei”, Hokkaido University, Kita 21, Nishi 10, Kita-ku, Sapporo 001-0021, Japan, and Research Institute for Computational Sciences, National Institute of Advanced Industrial Science and Technology, 1-1-1 Umezono,...

Publisher

American Chemical Society (ACS)

Subject

Physical and Theoretical Chemistry,Computer Science Applications

Link

https://pubs.acs.org/doi/pdf/10.1021/ct050066q

Reference69 articles.

1. The Hydrolysis of RNA: From Theoretical Calculations to the Hammerhead Ribozyme-Mediated Cleavage of RNA

2. Unifying the Current Data on the Mechanism of Cleavage–Transesterification of RNA

3. Self-cleavage of plus and minus RNA transcripts of avocado sunblotch viroid

4. A small catalytic oligoribonucleotide

5. Simple RNA enzymes with new and highly specific endoribonuclease activities

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