g_elpot: A Tool for Quantifying Biomolecular Electrostatics from Molecular Dynamics Trajectories-Reference-Cited by-同舟云学术

g_elpot: A Tool for Quantifying Biomolecular Electrostatics from Molecular Dynamics Trajectories

Published:2021-04-29 Issue:5 Volume:17 Page:3157-3167
ISSN:1549-9618
Container-title:Journal of Chemical Theory and Computation
language:en
Short-container-title:J. Chem. Theory Comput.

Author:

Kostritskii Andrei Y.¹²³^ORCID,Alleva Claudia¹,Cönen Saskia¹³,Machtens Jan-Philipp¹³^ORCID

Affiliation:

1. Institute of Biological Information Processing (IBI-1), Molekular- und Zellphysiologie, and JARA-HPC, Forschungszentrum Jülich, 52425 Jülich, Germany

2. Department of Physics, RWTH Aachen University, 52062 Aachen, Germany

3. Institute of Clinical Pharmacology, RWTH Aachen University, 52062 Aachen, Germany

Funder

RWTH Aachen University

Deutsche Forschungsgemeinschaft

Publisher

American Chemical Society (ACS)

Subject

Physical and Theoretical Chemistry,Computer Science Applications

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jctc.0c01246

Reference79 articles.

1. Classical Electrostatics in Biology and Chemistry

2. DelPhi Suite: New Developments and Review of Functionalities

3. Electrostatics of nanosystems: Application to microtubules and the ribosome

4. APBSmem: A Graphical Interface for Electrostatic Calculations at the Membrane

5. Computational Methods for Biomolecular Electrostatics

Cited by 7 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Microenvironment Drives Reentrant Condensation of Aβ40;2024-04-29

2. Transport mechanism of DgoT, a bacterial homolog of SLC17 organic anion transporters;2024-02-08

3. Domain- and state-specific shape of the electric field tunes voltage sensing in voltage-gated sodium channels;Biophysical Journal;2023-05

4. Sequence-Specific Structural Features and Solvation Properties of Transcription Factor Binding DNA Motifs: Insights from Molecular Dynamics Simulation;The Journal of Physical Chemistry B;2022-11-02

5. Differential interactions of resting, activated, and desensitized states of the α7 nicotinic acetylcholine receptor with lipidic modulators;Proceedings of the National Academy of Sciences;2022-10-17