SPICA Force Field for Proteins and Peptides-Reference-Cited by-同舟云学术

SPICA Force Field for Proteins and Peptides

Published:2022-04-12 Issue:5 Volume:18 Page:3204-3217
ISSN:1549-9618
Container-title:Journal of Chemical Theory and Computation
language:en
Short-container-title:J. Chem. Theory Comput.

Author:

Kawamoto Shuhei¹,Liu Huihui¹^ORCID,Miyazaki Yusuke¹²,Seo Sangjae¹³,Dixit Mayank¹,DeVane Russell⁴,MacDermaid Christopher⁵,Fiorin Giacomo⁵^ORCID,Klein Michael L.⁵^ORCID,Shinoda Wataru¹²⁶^ORCID

Affiliation:

1. Department of Materials Chemistry, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8603, Japan

2. Research Institute for Interdisciplinary Science, Okayama University, 3-1-1 Tsushima-naka, Kita-ku, Okayama 700-8530, Japan

3. Korea Institute of Science and Technology Information, 245 Daehak-ro, Daejeon 34141, Republic of Korea

4. Modeling & Simulation, Corporate Research & Development, The Procter and Gamble Company, West Chester, Ohio 45069, United States

5. Institute for Computational Molecular Science, Temple University, 1925 North 12th Street, Philadelphia, Pennsylvania 19122, United States

6. Department of Chemistry, Faculty of Science, Okayama University, 3-1-1 Tsushima-naka, Kita-ku, Okayama 700-8530, Japan

Funder

National Science Foundation

Ministry of Education, Culture, Sports, Science and Technology

Publisher

American Chemical Society (ACS)

Subject

Physical and Theoretical Chemistry,Computer Science Applications

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jctc.1c01207

Reference100 articles.

1. Multi-property fitting and parameterization of a coarse grained model for aqueous surfactants

2. Large-Scale Molecular Dynamics Simulations of Self-Assembling Systems

3. Modeling Protein–Protein Recognition in Solution Using the Coarse-Grained Force Field SCORPION

4. Two-bead polarizable water models combined with a two-bead multipole force field (TMFF) for coarse-grained simulation of proteins

5. HyRes: a coarse-grained model for multi-scale enhanced sampling of disordered protein conformations

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