AlphaFold2-RAVE: From Sequence to Boltzmann Ranking-Reference-Cited by-同舟云学术

AlphaFold2-RAVE: From Sequence to Boltzmann Ranking

Published:2023-05-12 Issue:14 Volume:19 Page:4351-4354
ISSN:1549-9618
Container-title:Journal of Chemical Theory and Computation
language:en
Short-container-title:J. Chem. Theory Comput.

Author:

Vani Bodhi P.¹,Aranganathan Akashnathan²,Wang Dedi²^ORCID,Tiwary Pratyush³^ORCID

Affiliation:

1. Institute for Physical Science and Technology, University of Maryland, College Park, Maryland 20742, United States

2. Biophysics Program and Institute for Physical Science and Technology, University of Maryland, College Park, Maryland 20742, United States

3. Department of Chemistry and Biochemistry and Institute for Physical Science and Technology, University of Maryland, College Park, Maryland 20742, United States

Funder

National Institute of General Medical Sciences

Publisher

American Chemical Society (ACS)

Subject

Physical and Theoretical Chemistry,Computer Science Applications

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jctc.3c00290

Reference28 articles.

1. Highly accurate protein structure prediction with AlphaFold

2. Miao, Y.; McCammon, J. A. Annual Reports in Computational Chemistry; Elsevier, 2017; Vol. 13; pp 231–278.

3. Accurate prediction of protein structures and interactions using a three-track neural network

4. Can AlphaFold2 predict the impact of missense mutations on structure?

5. Sampling alternative conformational states of transporters and receptors with AlphaFold2

Cited by 35 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Empowering AlphaFold2 for protein conformation selective drug discovery with AlphaFold2-RAVE;eLife;2024-09-06

2. Empowering AlphaFold2 for protein conformation selective drug discovery with AlphaFold2-RAVE;eLife;2024-09-06

3. AlphaFold-SFA: Accelerated sampling of cryptic pocket opening, protein-ligand binding and allostery by AlphaFold, slow feature analysis and metadynamics;PLOS ONE;2024-08-27

4. AlphaFold and Protein Folding: Not Dead Yet! The Frontier Is Conformational Ensembles;Annual Review of Biomedical Data Science;2024-08-23

5. Empowering AlphaFold2 for protein conformation selective drug discovery with AlphaFold2-RAVE;2024-08-14