Utility of Covalent Labeling Mass Spectrometry Data in Protein Structure Prediction with Rosetta-Reference-Cited by-同舟云学术

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Utility of Covalent Labeling Mass Spectrometry Data in Protein Structure Prediction with Rosetta

Published:2019-04-04 Issue:5 Volume:15 Page:3410-3424
ISSN:1549-9618
Container-title:Journal of Chemical Theory and Computation
language:en
Short-container-title:J. Chem. Theory Comput.

Author:

Aprahamian Melanie L.¹,Lindert Steffen¹^ORCID

Affiliation:

1. Department of Chemistry and Biochemistry, Ohio State University, Columbus, Ohio 43210, United States

Funder

Dr. Ralph and Marian Falk Medical Research Trust

National Institutes of Health

National Science Foundation

Publisher

American Chemical Society (ACS)

Subject

Physical and Theoretical Chemistry,Computer Science Applications

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jctc.9b00101

Reference52 articles.

1. Probing protein structure by amino acid-specific covalent labeling and mass spectrometry

2. Probing the Topology of the Glycine Receptor by Chemical Modification Coupled to Mass Spectrometry

3. Structure Characterization of Functional Histidine Residues and Carbethoxylated Derivatives in Peptides and Proteins by Mass Spectrometry

4. Surface topology of Minibody by selective chemical modifications and mass spectrometry

5. Analyzing the structure of macromolecules in their native cellular environment using hydroxyl radical footprinting

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1. Deep-Learning Structure Elucidation from Single-Mutant Deep Mutational Scanning;2024-05-19

2. Predicting ion mobility collision cross sections using projection approximation with ROSIE-PARCS webserver;Briefings in Bioinformatics;2023-08-22

3. Protein complex prediction using Rosetta, AlphaFold, and mass spectrometry covalent labeling;Nature Communications;2022-12-21

4. Protein shape sampled by ion mobility mass spectrometry consistently improves protein structure prediction;Nature Communications;2022-07-28

5. Simulation of Energy-Resolved Mass Spectrometry Distributions from Surface-Induced Dissociation;Analytical Chemistry;2022-07-14

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