Alchemical Free-Energy Calculations of Watson–Crick and Hoogsteen Base Pairing Interconversion in DNA
Author:
Affiliation:
1. Laboratory of Molecular Modelling & Drug Discovery, Istituto Italiano di Tecnologia, Via Morego 30, Genoa 16163, Italy
Funder
Associazione Italiana per la Ricerca sul Cancro
Publisher
American Chemical Society (ACS)
Subject
Physical and Theoretical Chemistry,Computer Science Applications
Link
https://pubs.acs.org/doi/pdf/10.1021/acs.jctc.2c00848
Reference47 articles.
1. Replication by human DNA polymerase-ι occurs by Hoogsteen base-pairing
2. Human DNA Polymerase ι Incorporates dCTP Opposite Template G via a G.C+ Hoogsteen Base Pair
3. Diversity in DNA recognition by p53 revealed by crystal structures with Hoogsteen base pairs
4. New Insights into the Role of DNA Shape on Its Recognition by p53 Proteins
5. A Hoogsteen base pair embedded in undistorted B-DNA
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