Exploring LacI–DNA Dynamics by Multiscale Simulations Using the SIRAH Force Field
Author:
Affiliation:
1. Biomolecular Simulations Group, Institut Pasteur de Montevideo, Montevideo, Uruguay, 11400
Funder
Fondo para la Convergencia Estructural del MERCOSUR
Publisher
American Chemical Society (ACS)
Subject
Physical and Theoretical Chemistry,Computer Science Applications
Link
https://pubs.acs.org/doi/pdf/10.1021/acs.jctc.5b00575
Reference72 articles.
1. The lac repressor
2. Crystal Structure of lac Repressor Core Tetramer and Its Implications for DNA Looping
3. Modeling the Lac repressor-operator assembly: The influence of DNA looping on Lac repressor conformation
4. Multiscale Method for Simulating Protein-DNA Complexes
5. Wrapping of flanking non-operator DNA in lac repressor-operator complexes: implications for DNA looping 1 1Edited by R. Ebright
Cited by 32 articles. 订阅此论文施引文献 订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献
1. Role of Shape Deformation of DNA-Binding Sites in Regulating the Efficiency and Specificity in Their Recognition by DNA-Binding Proteins;JACS Au;2024-06-18
2. CGeNArate: a sequence-dependent coarse-grained model of DNA for accurate atomistic MD simulations of kb-long duplexes;Nucleic Acids Research;2024-05-30
3. ANNaMo: Coarse-grained modeling for folding and assembly of RNA and DNA systems;The Journal of Chemical Physics;2024-05-28
4. Skipping events impose repeated binding attempts: profound kinetic implications of protein–DNA conformational changes;Nucleic Acids Research;2024-05-08
5. Brewing COFFEE: A Sequence-Specific Coarse-Grained Energy Function for Simulations of DNA−Protein Complexes;Journal of Chemical Theory and Computation;2024-01-19
1.学者识别学者识别
2.学术分析学术分析
3.人才评估人才评估
"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811{复制后删除}0370
www.globalauthorid.com
TOP
Copyright © 2019-2024 北京同舟云网络信息技术有限公司 京公网安备11010802033243号 京ICP备18003416号-3