A Workflow for Improved Analysis of Cross-Linking Mass Spectrometry Data Integrating Parallel Accumulation-Serial Fragmentation with MeroX and Skyline-Reference-Cited by-同舟云学术

A Workflow for Improved Analysis of Cross-Linking Mass Spectrometry Data Integrating Parallel Accumulation-Serial Fragmentation with MeroX and Skyline

Published:2024-05-02 Issue:19 Volume:96 Page:7373-7379
ISSN:0003-2700
Container-title:Analytical Chemistry
language:en
Short-container-title:Anal. Chem.

Author:

Rojas Echeverri Juan Camilo¹²^ORCID,Hause Frank¹²³,Iacobucci Claudio¹²⁴,Ihling Christian H.¹²,Tänzler Dirk¹²,Shulman Nicholas⁵,Riffle Michael⁶^ORCID,MacLean Brendan X.⁵,Sinz Andrea¹²^ORCID

Affiliation:

1. Department of Pharmaceutical Chemistry and Bioanalytics, Martin-Luther-University Halle-Wittenberg, 06120 Halle, Germany

2. Center for Structural Mass Spectrometry, Martin-Luther-University Halle-Wittenberg, 06120 Halle, Germany

3. Institute for Molecular Medicine, Martin-Luther-University Halle-Wittenberg, 06120 Halle, Germany

4. Department of Physical and Chemical Sciences, University of L’Aquila, 67100 L’Aquila, Italy

5. Department of Genome Sciences, University of Washington, Seattle, Washington 98195, United States

6. Department of Biochemistry, University of Washington, Seattle, Washington 98195, United States

Funder

University of Washington

Martin-Luther-Universit?t Halle-Wittenberg

Deutsche Forschungsgemeinschaft

Bundesministerium f?r Wirtschaft und Energie

National Institute of General Medical Sciences

Region of Saxony-Anhalt

Publisher

American Chemical Society (ACS)

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.analchem.4c00829

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4. Flexibility of intrinsically disordered degrons in AUX/IAA proteins reinforces auxin co-receptor assemblies

5. Quantitative interactome analysis with chemical cross-linking and mass spectrometry