Evaluation of Distance Metrics and Spatial Autocorrelation in Uniform Manifold Approximation and Projection Applied to Mass Spectrometry Imaging Data-Reference-Cited by-同舟云学术

Evaluation of Distance Metrics and Spatial Autocorrelation in Uniform Manifold Approximation and Projection Applied to Mass Spectrometry Imaging Data

Published:2019-04-15 Issue:9 Volume:91 Page:5706-5714
ISSN:0003-2700
Container-title:Analytical Chemistry
language:en
Short-container-title:Anal. Chem.

Author:

Smets Tina¹^ORCID,Verbeeck Nico¹²,Claesen Marc¹²,Asperger Arndt³,Griffioen Gerard⁴,Tousseyn Thomas⁵,Waelput Wim⁶,Waelkens Etienne⁷,De Moor Bart¹

Affiliation:

1. STADIUS Center for Dynamical Systems, Signal Processing, and Data Analytics, Department of Electrical Engineering (ESAT), KU Leuven, 3001 Leuven, Belgium

2. Aspect Analytics NV, C-mine 12, 3600 Genk, Belgium

3. Bruker Daltonik GmbH, Fahrenheitstrasse 4, 28359 Bremen, Germany

4. reMYND, Bio-Incubator, Gaston Geenslaan 1, 3000 Leuven, Belgium

5. Department of Pathology, University Hospitals KU Leuven, 3001 Leuven, Belgium

6. Department of Pathology, UZ-Brussel, 1000 Brussels, Belgium

7. Department of Cellular and Molecular Medicine, KU Leuven, 3000 Leuven, Belgium

Funder

Fonds Wetenschappelijk Onderzoek

Fonds De La Recherche Scientifique - FNRS

Agentschap voor Innovatie door Wetenschap en Technologie

KU Leuven

Industrial Research Fund (IOF)

Agentschap Innoveren en Ondernemen (VLAIO)

Publisher

American Chemical Society (ACS)

Subject

Analytical Chemistry

Link

http://pubs.acs.org/doi/pdf/10.1021/acs.analchem.8b05827

Reference23 articles.

1. Molecular Imaging of Biological Samples: Localization of Peptides and Proteins Using MALDI-TOF MS

2. Mass spectrometry imaging with high resolution in mass and space

3. MALDI imaging mass spectrometry: statistical data analysis and current computational challenges

4. Memory Efficient Principal Component Analysis for the Dimensionality Reduction of Large Mass Spectrometry Imaging Data Sets

5. Siy, P. W.; Moffitt, R. A.; Parry, R. M.; Chen, Y.; Liu, Y.; Sullards, M. C.; Merrill, A. H.; Wang, M. D. Matrix factorization techniques for analysis of imaging mass spectrometry data. Proceedings of the 8th IEEE International Conference on Bioinformatics and Bioengineering (BIBE 2008), Athens, Greece, Oct 8–10, 2008.

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