DeepDigest: Prediction of Protein Proteolytic Digestion with Deep Learning-Reference-Cited by-同舟云学术

DeepDigest: Prediction of Protein Proteolytic Digestion with Deep Learning

Published:2021-04-07 Issue:15 Volume:93 Page:6094-6103
ISSN:0003-2700
Container-title:Analytical Chemistry
language:en
Short-container-title:Anal. Chem.

Author:

Yang Jinghan¹²,Gao Zhiqiang¹²,Ren Xiuhan³,Sheng Jie⁴,Xu Ping⁴^ORCID,Chang Cheng⁴,Fu Yan¹²^ORCID

Affiliation:

1. CEMS, NCMIS, RCSDS, Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing 100190, P. R. China

2. School of Mathematical Sciences, University of Chinese Academy of Sciences, Beijing 100049, P. R. China

3. School of Sciences, China University of Mining & Technology, Beijing 100083, P. R. China

4. State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing), Beijing Institute of Lifeomics, Beijing 102206, P. R. China

Funder

National Natural Science Foundation of China

National Key R&D Program of China

Foundation of Medicine of China

Publisher

American Chemical Society (ACS)

Subject

Analytical Chemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.analchem.0c04704

Reference52 articles.

1. Next-generation proteomics: towards an integrative view of proteome dynamics

2. Six alternative proteases for mass spectrometry–based proteomics beyond trypsin

3. Reversible Lysine Derivatization Enabling Improved Arg-C Digestion, a Highly Specific Arg-C Digestion Using Trypsin

4. iHPDM: In Silico Human Proteome Digestion Map with Proteolytic Peptide Analysis and Graphical Visualizations

5. Comprehensive Analysis of Protein Digestion Using Six Trypsins Reveals the Origin of Trypsin As a Significant Source of Variability in Proteomics

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