First Community-Wide, Comparative Cross-Linking Mass Spectrometry Study

Author:

Iacobucci Claudio1,Piotrowski Christine1,Aebersold Ruedi23,Amaral Bruno C.4,Andrews Philip5,Bernfur Katja6,Borchers Christoph78910ORCID,Brodie Nicolas I.7,Bruce James E.11ORCID,Cao Yong12,Chaignepain Stéphane13,Chavez Juan D.11,Claverol Stéphane14,Cox Jürgen15ORCID,Davis Trisha16,Degliesposti Gianluca17,Dong Meng-Qiu12,Edinger Nufar18,Emanuelsson Cecilia6ORCID,Gay Marina19,Götze Michael20,Gomes-Neto Francisco21,Gozzo Fabio C.4ORCID,Gutierrez Craig22,Haupt Caroline23,Heck Albert J. R.24ORCID,Herzog Franz25,Huang Lan22ORCID,Hoopmann Michael R.26ORCID,Kalisman Nir18,Klykov Oleg24ORCID,Kukačka Zdeněk27,Liu Fan28,MacCoss Michael J.11,Mechtler Karl29ORCID,Mesika Ravit18,Moritz Robert L.26ORCID,Nagaraj Nagarjuna30,Nesati Victor31,Neves-Ferreira Ana G. C.21,Ninnis Robert31,Novák Petr27ORCID,O’Reilly Francis J.32,Pelzing Matthias31,Petrotchenko Evgeniy7,Piersimoni Lolita5,Plasencia Manolo5,Pukala Tara33ORCID,Rand Kasper D.34ORCID,Rappsilber Juri3235ORCID,Reichmann Dana18,Sailer Carolin36,Sarnowski Chris P.237,Scheltema Richard A.24ORCID,Schmidt Carla23ORCID,Schriemer David C.38ORCID,Shi Yi39,Skehel J. Mark17,Slavin Moriya18,Sobott Frank4041,Solis-Mezarino Victor25,Stephanowitz Heike28,Stengel Florian36,Stieger Christian E.29,Trabjerg Esben34,Trnka Michael42,Vilaseca Marta19,Viner Rosa43,Xiang Yufei39,Yilmaz Sule15,Zelter Alex16ORCID,Ziemianowicz Daniel38,Leitner Alexander2ORCID,Sinz Andrea1ORCID

Affiliation:

1. Department of Pharmaceutical Chemistry and Bioanalytics, Institute of Pharmacy, Charles Tanford Protein Center, Martin Luther University Halle-Wittenberg, Kurt-Mothes-Strasse 3a, 06120 Halle/Saale, Germany

2. Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, Otto-Stern-Weg 3, 8093 Zurich, Switzerland

3. Faculty of Science, University of Zurich, 8006 Zurich, Switzerland

4. Institute of Chemistry, University of Campinas, Campinas São Paulo 13083-970, Brazil

5. Departments of Biological Chemistry, Bioinformatics, and Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States

6. Department of Biochemistry and Structural Biology, Center for Molecular Protein Science, Lund University, 221 00 Lund, Sweden

7. University of Victoria−Genome British Columbia Proteomics Centre, Vancouver Island Technology Park, Victoria, British Columbia V8Z 7X8, Canada

8. Department of Biochemistry and Microbiology, University of Victoria, Petch Building, Room 270d, 3800 Finnerty Road, Victoria, British Columbia V8P 5C2, Canada

9. Gerald Bronfman Department of Oncology, Jewish General Hospital, McGill University, 3755 Côte Ste-Catherine Road, Montréal, Quebec H3T 1E2, Canada

10. Proteomics Centre, Segal Cancer Centre, Lady Davis Institute, Jewish General Hospital, McGill University, 3755 Côte Ste-Catherine Road, Montréal, Quebec H3T 1E2, Canada

11. Department of Genome Sciences, University of Washington, Seattle, Washington 98195, United States

12. National Institute of Biological Sciences, Beijing 7 Science Park Road, ZGC Life Science Park, 102206 Beijing, China

13. CBMN, UMR 5248, CNRS, Université de Bordeaux, INP Bordeaux, Pessac 33607, France

14. Centre de Génomique Fonctionnelle, Plateforme Protéome, Université de Bordeaux, Bordeaux33000, France

15. Computational Systems Biochemistry Research Group, Max-Planck-Institute of Biochemistry, Am Klopferspitz 18, 82152 Martinsried, Germany

16. Department of Biochemistry, University of Washington, Seattle, Washington 98195, United States

17. MRC Laboratory of Molecular Biology, Cambridge Biomedical Campus, Francis Crick Avenue, Cambridge CB2 0QH, U.K.

18. Department of Biological Chemistry, The Alexander Silberman Institute of Life Sciences, Safra Campus Givat Ram, The Hebrew University of Jerusalem, Jerusalem 91904, Israel

19. Institute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology (BIST), Baldiri Reixac 10, 08028 Barcelona, Spain

20. Institute for Biochemistry and Biotechnology, Charles Tanford Protein Center, Martin Luther University Halle-Wittenberg, Kurt-Mothes-Strasse 3a, 06120 Halle/Saale, Germany

21. Laboratory of Toxinology, Oswaldo Cruz Institute, Fiocruz, Avenida Brasil 4365 (Moorish Castle), Manguinhos, Rio de Janeiro, Rio de Janeiro 21040-900, Brazil

22. Department of Physiology & Biophysics, University of California, Irvine, California 92697, United States

23. Interdisciplinary Research Center HALOmem, Institute for Biochemistry and Biotechnology, Charles Tanford Protein Center, Martin Luther University Halle-Wittenberg, Kurt-Mothes-Strasse 3a, 06120 Halle/Saale, Germany

24. Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht and Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands

25. Gene Center Munich, Department of Biochemistry, Faculty of Chemistry and Pharmacy, Ludwig Maximilians University of Munich, Feodor-Lynen-Strasse 25, 81377 Munich, Germany

26. Institute for Systems Biology, 401 Terry Avenue North, Seattle, Washington 98109, United States

27. Institute of Microbiology, BIOCEV, Prumyslova 595, 252 50 Vestec, Czech Republic

28. Leibniz Institute of Molecular Pharmacology (FMP), Robert-Rössle-Strasse 10, 13125 Berlin, Germany

29. Protein Chemistry Facility, Research Institute of Molecular Pathology (IMP) and Institute of Molecular Biotechnology (IMBA), Vienna Biocenter (VBC), Dr. Bohr-Gasse 3, 1030 Vienna, Austria

30. Biochemistry Core Facility, Max-Planck-Institute of Biochemistry, Am Klopferspitz 18, 82152 Martinsried, Germany

31. Analytical Biochemistry, CSL Limited, Bio21 Institute, 30 Flemington Road, 3010 Parkville, Melbourne, Australia

32. Chair of Bioanalytics, Institute of Biotechnology Technische Universität Berlin, 13355 Berlin, Germany

33. Discipline of Chemistry, Faculty of Sciences, University of Adelaide, North Terrace, Adelaide, South Australia 5005, Australia

34. Department of Pharmacy, University of Copenhagen, 2100 Copenhagen, Denmark

35. Wellcome Trust Centre for Cell Biology, School of Biological Sciences, University of Edinburgh, EH9 3BF Edinburgh, U.K.

36. University of Konstanz, Department of Biology, Universitätsstrasse 10, 78457 Konstanz, Germany

37. PhD Program in Systems Biology, University of Zurich and ETH Zurich, 8092 Zurich, Switzerland

38. Department of Biochemistry & Molecular Biology, Robson DNA Science Centre, University of Calgary, 3330 Hospital Drive North West, Calgary, Alberta T2N 4N1, Canada

39. Department of Cell Biology, University of Pittsburgh, School of Medicine, Pittsburgh, Pennsylvania 15213, United States

40. Department of Chemistry, University of Antwerp, Groenenborgerlaan 171, 2020 Antwerp, Belgium

41. The Astbury Centre for Structural Molecular Biology and School of Molecular and Cellular Biology, University of Leeds, LS2 9JT Leeds, U.K.

42. UCSF Mass Spectrometry Facility, Genentech Hall, 600 16th Street, San Francisco, California 94158, United States

43. Thermo Fisher Scientific, 355 River Oaks Parkway, San Jose, California 95134, United States

Funder

European Cooperation in Science and Technology

Publisher

American Chemical Society (ACS)

Subject

Analytical Chemistry

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