Key Roles of the Downstream Mobile Jaw of Escherichia coli RNA Polymerase in Transcription Initiation-Reference-Cited by-同舟云学术

Key Roles of the Downstream Mobile Jaw of Escherichia coli RNA Polymerase in Transcription Initiation

Published:2012-11-14 Issue:47 Volume:51 Page:9447-9459
ISSN:0006-2960
Container-title:Biochemistry
language:en
Short-container-title:Biochemistry

Author:

Drennan Amanda¹,Kraemer Mark¹,Capp Michael¹,Gries Theodore¹,Ruff Emily²,Sheppard Carol³,Wigneshweraraj Sivaramesh³,Artsimovitch Irina⁴,Record M. Thomas¹²

Affiliation:

1. Department of Biochemistry, The University of Wisconsin-Madison, Madison, Wisconsin 53706, United States

2. Department of Chemistry, The University of Wisconsin-Madison, Madison, Wisconsin 53706, United States

3. Department of Microbiology and Centre for Molecular Microbiology and Infection, Imperial College London, SW7 2AZ

4. Department of Microbiology and Center for RNA Biology, The Ohio State University, Columbus, Ohio 43210, United States

Publisher

American Chemical Society (ACS)

Subject

Biochemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/bi301260u

Reference37 articles.

1. One-step DNA melting in the RNA polymerase cleft opens the initiation bubble to form an unstable open complex

2. Probing DNA Binding, DNA Opening, and Assembly of a Downstream Clamp/Jaw in Escherichia coli RNA Polymerase−λPR Promoter Complexes Using Salt and the Physiological Anion Glutamate

3. Late Steps in the Formation of E. coli RNA Polymerase—λPR Promoter Open Complexes: Characterization of Conformational Changes by Rapid [Perturbant] Upshift Experiments

4. Kinetic Studies and Structural Models of the Association of E.coli σ70 RNA Polymerase with the λPR Promoter: Large Scale Conformational Changes in Forming the Kinetically Significant Intermediates

5. Mechanism of Bacterial Transcription Initiation: RNA Polymerase - Promoter Binding, Isomerization to Initiation-Competent Open Complexes, and Initiation of RNA Synthesis

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1. Clamp Interactions with +3/+6 Duplex and Upstream-to-Downstream Allosteric Effects in Late Steps of Forming a Stable RNA Polymerase-Promoter Open Complex;Journal of Molecular Biology;2023-03

2. Step-by-Step Regulation of Productive and Abortive Transcription Initiation by Pyrophosphorolysis;Journal of Molecular Biology;2022-07

3. Roles of Clamp Closing and Allosteric Effects of Discriminator and Upstream Interactions on Downstream Elements in Stabilizing an E. coli RNA Polymerase-Promoter Open Complex;2022-04-18

4. Structural origins of Escherichia coli RNA polymerase open promoter complex stability;Proceedings of the National Academy of Sciences;2021-10-01

5. Temperature effects on RNA polymerase initiation kinetics reveal which open complex initiates and that bubble collapse is stepwise;Proceedings of the National Academy of Sciences;2021-07-21