Extension of the Variational Free Energy Profile and Multistate Bennett Acceptance Ratio Methods for High-Dimensional Potential of Mean Force Profile Analysis
Author:
Affiliation:
1. Laboratory for Biomolecular Simulation Research, Institute for Quantitative Biomedicine and Department of Chemistry and Chemical Biology, Rutgers University, Piscataway, New Jersey 08854-8087, United States
Funder
National Institute of General Medical Sciences
Publisher
American Chemical Society (ACS)
Subject
Physical and Theoretical Chemistry
Link
https://pubs.acs.org/doi/pdf/10.1021/acs.jpca.1c00736
Reference111 articles.
1. Free energy calculations: a breakthrough for modeling organic chemistry in solution
2. Computational Alchemy
3. Springer Series in Chemical Physics;Chipot C.,2007
4. Alchemical Binding Free Energy Calculations in AMBER20: Advances and Best Practices for Drug Discovery
5. A method for determining reaction paths in large molecules: Application to myoglobin
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