Evidence That Nucleophile Deprotonation Exceeds Bond Formation in the HDV Ribozyme Transition State-Reference-Cited by-同舟云学术

Evidence That Nucleophile Deprotonation Exceeds Bond Formation in the HDV Ribozyme Transition State

Published:2018-05-07 Issue:25 Volume:57 Page:3465-3472
ISSN:0006-2960
Container-title:Biochemistry
language:en
Short-container-title:Biochemistry

Author:

Lu Jun¹,Koo Selene C.¹,Weissman Benjamin P.¹^ORCID,Harris Michael E.²,Li Nan-Sheng¹^ORCID,Piccirilli Joseph A.¹^ORCID

Affiliation:

1. Department of Biochemistry and Molecular Biology and Department of Chemistry, University of Chicago, 929 East 57th Street, Chicago, Illinois 60637, United States

2. Department of Chemistry, University of Florida, 214 Leigh Hall, Gainesville, Florida 32611, United States

Funder

National Institute of Allergy and Infectious Diseases

National Institute of General Medical Sciences

Publisher

American Chemical Society (ACS)

Subject

Biochemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.biochem.8b00031

Reference35 articles.

1. HDV Family of Self-Cleaving Ribozymes

2. A conformational switch controls hepatitis delta virus ribozyme catalysis

3. A 1.9 Å Crystal Structure of the HDV Ribozyme Precleavage Suggests both Lewis Acid and General Acid Mechanisms Contribute to Phosphodiester Cleavage

4. New tools provide a second look at HDV ribozyme structure, dynamics and cleavage

5. Catalytic Strategies of the Hepatitis Delta Virus Ribozymes

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2. Metal ion interactions with nucleic acids;Comprehensive Inorganic Chemistry III;2023

3. Self-cleaving ribozymes: substrate specificity and synthetic biology applications;RSC Chemical Biology;2021

4. Dynamical ensemble of the active state and transition state mimic for the RNA-cleaving 8–17 DNAzyme in solution;Nucleic Acids Research;2019-09-12