Computer Folding of RNA Tetraloops? Are We There Yet?-Reference-Cited by-同舟云学术

Computer Folding of RNA Tetraloops? Are We There Yet?

Published:2013-03-07 Issue:4 Volume:9 Page:2115-2125
ISSN:1549-9618
Container-title:Journal of Chemical Theory and Computation
language:en
Short-container-title:J. Chem. Theory Comput.

Author:

Kührová Petra¹,Banáš Pavel¹²,Best Robert B.³,Šponer Jiří²⁴,Otyepka Michal¹²

Affiliation:

1. Regional Centre of Advanced Technologies and Materials, Department of Physical Chemistry, Faculty of Science, Palacky University Olomouc, 17. listopadu 12, 771 46 Olomouc, Czech Republic

2. Institute of Biophysics, Academy of Sciences of the Czech Republic, Kralovopolska 135, 612 65 Brno, Czech Republic

3. Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland 20892-0520, United States

4. CEITEC − Central European Institute of Technology, Masaryk University, Campus Bohunice, Kamenice 5, 625 00 Brno, Czech Republic

Publisher

American Chemical Society (ACS)

Subject

Physical and Theoretical Chemistry,Computer Science Applications

Link

https://pubs.acs.org/doi/pdf/10.1021/ct301086z

Reference97 articles.

1. Structures, Kinetics, Thermodynamics, and Biological Functions of RNA Hairpins

2. CUUCGG hairpins: extraordinarily stable RNA secondary structures associated with various biochemical processes.

3. Tetraloops and RNA folding

4. Architecture of ribosomal RNA: constraints on the sequence of "tetra-loops".

5. The nature of preferred hairpin structures in 16S-like rRNA variable regions

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