XLink-DB: Database and Software Tools for Storing and Visualizing Protein Interaction Topology Data-Reference-Cited by-同舟云学术

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XLink-DB: Database and Software Tools for Storing and Visualizing Protein Interaction Topology Data

Published:2013-03-05 Issue:4 Volume:12 Page:1989-1995
ISSN:1535-3893
Container-title:Journal of Proteome Research
language:en
Short-container-title:J. Proteome Res.

Author:

Zheng Chunxiang¹,Weisbrod Chad R.²,Chavez Juan D.²,Eng Jimmy K.³,Sharma Vagisha³,Wu Xia²,Bruce James E.¹²

Affiliation:

1. Department of Chemistry, University of Washington, Seattle, Washington, United States

2. Department of Genome Sciences, University of Washington, Seattle, Washington, United States

3. University of Washington Proteomics Resource, Seattle, Washington, United States

Publisher

American Chemical Society (ACS)

Subject

General Chemistry,Biochemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/pr301162j

Reference33 articles.

1. Analysis of protein complexes using mass spectrometry

2. Isotope-Tagged Cross-Linking Reagents. A New Tool in Mass Spectrometric Protein Interaction Analysis

3. A Generic Strategy To Analyze the Spatial Organization of Multi-Protein Complexes by Cross-Linking and Mass Spectrometry

4. Probing three-dimensional structure of bovine serum albumin by chemical cross-linking and mass spectrometry

5. Chemical Cross-linking and Mass Spectrometry for Protein Structural Modeling

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1. CombFold: predicting structures of large protein assemblies using a combinatorial assembly algorithm and AlphaFold2;Nature Methods;2024-02-07

2. Integrated Analysis of Cross-Links and Dead-End Peptides for Enhanced Interpretation of Quantitative XL-MS;Journal of Proteome Research;2023-08-08

3. Integrated Analysis of Cross-Links and Dead-End Peptides for Enhanced Interpretation of Quantitative XL-MS;2023-05-29

4. Predicting structures of large protein assemblies using combinatorial assembly algorithm and AlphaFold2;2023-05-16

5. A deep learning model for predicting optimal distance range in crosslinking mass spectrometry data;PROTEOMICS;2023-05-03

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