Denoising Autoencoder Trained on Simulation-Derived Structures for Noise Reduction in Chromatin Scanning Transmission Electron Microscopy-Reference-Cited by-同舟云学术

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Denoising Autoencoder Trained on Simulation-Derived Structures for Noise Reduction in Chromatin Scanning Transmission Electron Microscopy

Published:2023-06-05 Issue:6 Volume:9 Page:1200-1212
ISSN:2374-7943
Container-title:ACS Central Science
language:en
Short-container-title:ACS Cent. Sci.

Author:

Alvarado Walter¹^ORCID,Agrawal Vasundhara²,Li Wing Shun³,Dravid Vinayak P.⁴^ORCID,Backman Vadim²³,de Pablo Juan J.⁵^ORCID,Ferguson Andrew L.⁵^ORCID

Affiliation:

1. Biophysical Sciences, University of Chicago, Chicago, Illinois 60637, United States

2. Department of Biomedical Engineering, Northwestern University, Evanston, Illinois 60208, United States

3. Department of Applied Physics, Northwestern University, Evanston, Illinois 60208, United States

4. Department of Materials Sciences and Engineering, Northwestern University, Evanston, Illinois 60208, United States

5. Pritzker School of Molecular Engineering, University of Chicago, Chicago, Illinois 60637, United States

Funder

U.S. Department of Health and Human Services

National Science Foundation

Rob and Kristin Goldman

Publisher

American Chemical Society (ACS)

Subject

General Chemical Engineering,General Chemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/acscentsci.3c00178

Reference60 articles.

1. Nucleosome Structure and Function

2. Conserved Substitution Patterns around Nucleosome Footprints in Eukaryotes and Archaea Derive from Frequent Nucleosome Repositioning through Evolution

3. Chromatin without the 30-nm fiber

4. Solenoidal model for superstructure in chromatin.

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1. A molecular view into the structure and dynamics of phase-separated chromatin;2024-07-11

2. LCPOM: Precise Reconstruction of Polarized Optical Microscopy Images of Liquid Crystals;Chemistry of Materials;2024-03-28

3. Rapid scanning method for SICM based on autoencoder network;Micron;2024-02

4. Convolutional Machine Learning Method for Accelerating Nonequilibrium Green’s Function Simulations in Nanosheet Transistor;IEEE Transactions on Electron Devices;2023-10

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